Function reference • DSAIDE

All functions
`dsaidemenu()`	The main menu for the DSAIDE package
`flu1918data`	1918 Influenza mortality data
`generate_documentation()`	A helper function which processes and displays the documentation part for each app
`generate_fctcall()`	A helper function that produces a call to a simulator function for specific settings
`generate_ggplot()`	A helper function that takes simulation results and produces ggplot plots
`generate_plotly()`	A helper function that takes simulation results and produces plotly plots
`generate_shinyinput()`	A helper function that takes a model and generates shiny UI elements
`generate_text()`	A helper function that takes result from the simulators and produces text output
`norodata`	Cases of norovirus during an outbreak
`run_model()`	A function that runs an app for specific settings and processes results for plot and text generation
`simulate_Characteristics_of_ID_ode()`	Characteristics of ID
`simulate_Complex_ID_Control_ode()`	Complex ID Control
`simulate_directtransmission_ode()`	Simulation of a compartmental infectious disease transmission model illustrating different types of direct transmission
`simulate_Drug_Resistance_Evolution_stochastic()`	Drug Resistance Evolution
`simulate_Environmental_Transmission_model_ode()`	Environmental Transmission model
`simulate_flu_fit()`	Fitting a SIR-type model to flu data
`simulate_Host_Heterogeneity_Model_ode()`	Host Heterogeneity Model
`simulate_idcontrolmultigroup_ode()`	Simulation of a compartmental infectious disease transmission model with 3 types of hosts and intervention
`simulate_idcontrolmultioutbreak_ode()`	Simulation of a compartmental infectious disease transmission model to study the reproductive number
`simulate_idpatterns_ode()`	Simulation of a compartmental infectious disease transmission model including seasonality
`simulate_idsurveillance_ode()`	Simulation of a compartmental infectious disease transmission model illustrating the impact of ID surveillance
`simulate_idvaccine_ode()`	Simulation of a compartmental infectious disease transmission model to study the reproductive number
`simulate_multipathogen_ode()`	Simulation of a compartmental infectious disease transmission model with 2 types of pathogens
`simulate_noro_fit()`	Fitting a simple SIR type model to norovirus outbreak data
`simulate_SEIRSd_model_stochastic()`	SEIRSd model
`simulate_SIRSd_model_ode()`	SIRSd model
`simulate_SIRSd_model_stochastic()`	SIRSd model
`simulate_SIR_modelexploration()`	Simulation to illustrate parameter scan of the basic SIR model with births and deaths #'
`simulate_SIR_model_discrete()`	SIR model
`simulate_SIR_model_ode()`	SIR model
`simulate_SIR_usanalysis()`	Simulation to illustrate uncertainty and sensitivity analysis
`simulate_Vector_transmission_model_ode()`	Vector transmission model

Reference

All functions