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A quick start to agdist

Source: vignettes/quickstart.Rmd
quickstart.Rmd

Overview

agdist is designed to allow you convenient computation of antigenic distance metrics for influenza (and possibly other pathogens).

Installation

agdist is not yet on CRAN. You need to install it from GitHub as follows:

  • Install the remotes package
  • Install agdist with remotes::install_github('ahgroup/agdist')

Starting Example

Here is a simple example to illustrate what agdist does.

Consider

Another example

Next steps

You just learned the basics of using agdist to compute antigenic distances. To dig deeper, you should continue with this vignette.